Bhageerath

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The current version of Bhageerath web server has been validated for the 50 globular proteins ( < 100 amino acids) consisting of 2-3 secondary structural elements (helices and strands). In each case it predicts a structure < 6 Å RMSD of the native in the final 10 lowest energy structures. The following table provides the PDB ID and name of the protein. Click on any PDB ID to access the predicted 10 lowest energy structures and their RMSDs.

Validation of Bhageerath

S. No.	PDB ID	NAME
1	1AB1	Si form Crambin
2	1ACW	P01, A Natural Scorpion Peptide Structurally Analogous to Scorpion Toxins Specific for Apamin-Sensitive Potassium Channel
3	1AHO	The Ab Initio Structure Determination and Refinement of a Scorpion Protein Toxin
4	1AIL	N-Terminal Fragment of NS1 Protein from Influenza A Virus
5	1B03	Solution Structure of Antibody-Bound HIV1 IIIB V3 Peptide
6	1B6Q	Alanine 31 Proline Mutant of Rop Protein
7	1BDC	Immunoglobulin-Binding B Domain of Staphylococcus Aureus Protein A
8	1BGK	Sea Anemone Toxin (BGK) with High Affinity for Voltage Dependent Potassium Channel
9	1BHI	Structure of Transactivation Domain of CRE-BP1/ATF-2
10	1BX7	Hirustasin from Hirudo Medicinalis
11	1DF5	Interactions between HIV-1 GP41 Core and Detergents and their Implications for Membrane Fusion
12	1DFN	Crystal Structure of Defensin HNP-3, an Amphiphilic Dimer Mechanisms of Membrane Permeabilization
13	1DV0	C-Terminal Uba Domain of Human Homologue of Rad23A (Hhr23A)
14	1E0Q	Mutant Peptide from the First N-Terminal 17 Amino Acid of Ubiquitin
15	1EDM	Epidermal Growth Factor-like Domain from Human Factor IX
16	1ENH	Structural Studies of the Engrailed Homeodomain
17	1FME	Solution Structure Of Fsd-Ey, A Novel Peptide Assuming A .-.-. Fold
18	1GAB	Structure of Albumin-Binding Domain
19	1GUU	Crystal Structure of C-Myb R1
20	1GV5	Crystal Structure of C-Myb R2
21	1GVD	Crystal Structure of C-Myb R2 V103L Mutant
22	1HDD	Engrailed Homeodomain
23	1I5X	HIV-1 GP41 Core
24	1I5Y	HIV-1 GP41 Core
25	1I6C	Solution Structure of PIN1 WW Domain
26	1IDY	Structure Of Myb Transforming Protein
27	1IRQ	Crystal Structure of Omega Transcriptional Repressor
28	1KU3	Crystal Structure of Thermus Aquatics RNA Polymerase Sigma Subunit Fragment, Region 4
29	1MBH	Mouse C-Myb DNA-Binding Domain Repeat 2
30	1MOF	Coat Protein
31	1NKD	Atomic Resolution (1.07 Structure of the Rop Mutant
32	1OVX	E.Coli ClpX chaperone zinc binding domain dimer
33	1PRV	Purine Repressor DNA-Binding Domain
34	1Q2K	Structure of BmBKTx1 a new potassium channel blocker from the Chinese Scorpion Buthus martensi Karsch
35	1QR8	Inhibition of HIV-1 Infectivity by Gp41 Core
36	1QR9	Inhibition of HIV-1 Infectivity by the GP41 Core: Role of a Conserved Hydrophobic Cavity in Membrane Fusion
37	1RES	Structure of SHK Toxin
38	1RJU	Crystal Structure Of A Truncated Form Of Yeast Copper Thionein
39	1ROO	Structure of SHK Toxin
40	1ROP	Structure of the ColE1 Rop Protein
41	1RPO	Rop Mutant with Ala Inserted on either Side of Asp 31
42	1SCY	Three Dimensional Structure of Scylltoxin
43	1VII	Thermostable Subdomain From Chicken Villin Headpiece
44	1WQC	An unusual fold for potassium channel blockers
45	1XRX	DNA-Binding Protein
46	1YIB	Structure of Human EB1 C- Terminal Dimerization Domain
47	1YRF	Chicken Villin Subdomain Hp-35
48	1YRI	Chicken Villin Subdomain Hp-35, N68H
49	2CPG	Transcriptional Repressor COPG
50	2ERL	Pheromone ER-1

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