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Validation of Bhageerath

PDB ID 1AIL
Protein Name N-Terminal Fragment of NS1 Protein from Influenza A Virus
Sequence (FASTA format) MDSNTVSSFQVDCFLWHVRKQVVDQELGDAPFLDRLRRDQKSLRGRGSTLGLNIEAATHVGKQIVEKILK
Secondary Structure Information H 3-25, H 30-50, H 54-69
Native Structure 1ail
H - Helix, B - Beta strand
The figure shows the Superimposition of the native structure with the lowest RMSD structure (PDB7) from the 10 lowest energy structures (Native is shown in Blue and lowest RMSD structure is in Red)
Predicted Structures
S.No Final 10 lowest energy structures RMSD(Å)
without end loops
1
PDB1
10.8
2
PDB2
6.6
3
PDB3
4.4
4
PDB4
6.4
5
PDB5
7.2
6
PDB6
8.9
7
PDB7
4.2
8
PDB8
8.5
9
PDB9
6.0
10
PDB10
4.2