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Validation of Bhageerath

PDB ID 1Q2K
Protein Name Structure of BmBKTx1 a new potassium channel blocker from the Chinese Scorpion Buthus martensi Karsch
Sequence (FASTA format) AACYSSDCRVKCVAMGFSSGKCINSKCKCYK
Secondary Structure Information H 4-15, S 20-22, S 27-29
Native Structure 1q2k
H - Helix, B - Beta strand
The figure shows the Superimposition of the native structure with the lowest RMSD structure (PDB9) from the 10 lowest energy structures (Native is shown in Blue and lowest RMSD structure is in Red)
Predicted Structures
S.No Final 10 lowest energy structures RMSD(Å)
without end loops
1
PDB1
7.4
2
PDB2
7.4
3
PDB3
7.2
4
PDB4
4.8
5
PDB5
5.8
6
PDB6
6.5
7
PDB7
5.7
8
PDB8
6.2
9
PDB9
4.2
10
PDB10
7.3