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Validation of Bhageerath

PDB ID	1HDD
Protein Name	Engrailed Homeodomain
Sequence (FASTA format)	RPRTAFSSEQLARLKREFNENRYLTERRRQQLSSELGLNEAQIKIWFQNKRAKIKKS
Secondary Structure Information	H 8-20, H 26-36, H 40-56
Native Structure	1hdd

H - Helix, B - Beta strand

The figure shows the Superimposition of the native structure with the lowest RMSD structure (PDB8) from the 10 lowest energy structures (Native is shown in Blue and lowest RMSD structure is in Red)

Predicted Structures

S.No	Final 10 lowest energy structures	RMSD(Å) without end loops
1	PDB1	10.2
2	PDB2	6.3
3	PDB3	10.2
4	PDB4	5.5
5	PDB5	11.1
6	PDB6	6.2
7	PDB7	9.8
8	PDB8	4.8
9	PDB9	7.0
10	PDB10	6.7

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