Results | viHumans

UniProt ID

Q9WGZ0

Status

Reviewed

Host

Homo Sapiens (Human) [TaxID: 9606]

Gene Name

ORF1

Protein Name

Probable capsid and replication-associated protein

Organism Name

Torque Teno Virus (isolate Human/Ghana/GH1/1996) (TTV)

Taxonomic Lineage

Viruses> SsDNA Viruses> Anelloviridae> Unclassified Anelloviridae> Torque Teno Virus> TT Virus Group 1> Torque Teno Virus (isolate Human/Ghana/GH1/1996) (TTV)

RefSeq

NC_002076.2 ; AB041007.1

PubMed ID

10077657 ; 17146841

Pathways Involved

Various pathway(s) in which protein is involved

KEGG

Not Available

Reactome

Not Available

Sequence

							MAYGWWRRRRRRWRRWRRRPWRRRWRTRRRRPARRRGRRRNVRRRRRGGRWRRRYRRWKRKGRRRKKAKIIIRQWQPNYRRRCNIVGYIPVLICGENTVS
RNYATHSDDTNYPGPFGGGMTTDKFTLRILYGEYKRFMNYWTASNEDLDLCRYLGVNLYFFRHPDVDFIIKINTMPPFLDTELTAPSIHPGMLALDKRAR
WIPSLKSRPGKKHYIKIRVGAPKMFTDKWYPQTDLCDMVLLTVYATAADMQYPFGSPLTDSVVVNFQVLQSMYDEKISILPDEKIQRQNLLTSISNYIPF
YNTTQTIAQLKPFVDAGNAISGTTTTTWGSLLNTTKFTTTTTTTYTYPGTTNTTVTFITANDSWYRGTVYNQNIKDVAKKAAELYSKATKAVLGNTFTTE
DYTLGYHGGLYSSIWLSPGRSYFETPGAYTDIKYNPFTDRGEGNMLWIDWLSKKNMNYDKVQSKCLISDLPLWAAAYGYVEFCAKSTGDQNIHMNARLLI
RSPFTDPQLLVHTDPTKGFVPYSLNFGNGKMPGGSSNVPIRMRAKWYPTLLHQQEVLEALAQSGPFAYHADIKKVSLGMKYRFKWIWGGNPVRQQVVRNP
CKETHSSGNRVPRSLQIVDPKYNSPELTFHTWDFKRGLFGPKAIQRMQQQPTTTDIFSAGRKRPRRDTEVYHSSQEGEQKESLLFPPVKLLRRVPPWEDS
QQEESGSQSSEEETQTVSQQLKQQLQQQRILGVKLRLLFNQVQKIQQNQDINPTLLPRGGDLASLFQIAP
						

Length

770

Alternate Sequence

Not Available

Non-standard residue

Not Available

Date of last Sequence modification

01-11-1999

Protein Existence

Inferred from homology

Amino Acid composition

Amino Acid	Count	% Frequency	Amino Acid	Count	% Frequency
Alanine (A)			Leucine (L)
Arginine (R)			Lysine (K)
Asparagine (N)			Methionine (M)
Aspartic Acid (D)			Phenylalanine (F)
Cysteine (C)			Proline (P)
Glutamine (Q)			Serine (S)
Glutamic Acid (E)			Threonine (T)
Glycine (G)			Tryptophan (W)
Histidine (H)			Tyrosine (Y)
Isoleucine (I)			Valine (V)

Sum of Absolute Deviation from Amino Acid Occurrence Frequencies

Aliphatic Index

Instability Index

Secondary Structure features

% Number of Residues in Helices	% Number of Residues in Strands	% Number of Residues in Coils

Structural Difficulty(SD) index

Role(s)

May self assemble to form an icosahedral capsid. Presumably essential to initiate and monitor viral genome replication by a rolling circle mechanism.

EC

Not Available

Experimentally known GO terms

GO:0006260 ; GO:0039615

Subcellular Location

Virion .

Domain(s)

Not Available

Motif(s)

Not Available

Methods of 3D structure generation

Predicted/Modelled

Experimetally known structure

Not Available

Active Site(s)

Not Available

Predicted 3D Structures

Protein couldn't be modeled using I-Tasser and Raptor X because of length constraints of the software.

Experimentally known Ligand(s)

Not Available

Virtually Screened Ligands

Virtual screening has been performed using RASPD

						Million Molecules

					
Best 20 Hit molecules 
Not Available