Results | viHumans

UniProt ID

Q9QJ40

Status

Reviewed

Host

Homo Sapiens (Human) [TaxID: 9606]

Gene Name

U27[Gene ID: 1497029 ]

Protein Name

DNA polymerase processivity factor (Phosphoprotein P41) (PP41) (Polymerase accessory protein) (PAP)

Organism Name

Human Herpesvirus 6B (strain Z29) (HHV-6 Variant B) (Human B Lymphotropic Virus)

Taxonomic Lineage

Viruses> DsDNA Viruses> No RNA Stage> Herpesvirales> Herpesviridae> Betaherpesvirinae> Roseolovirus> Human Herpesvirus 6B (HHV-6 Variant B) (Human B Lymphotropic Virus)> Human Herpesvirus 6B (strain Z29) (HHV-6 Variant B) (Human B Lymphotropic Virus)

RefSeq

NC_000898.1 ; AF157706.1

PubMed ID

10482553

Pathways Involved

Various pathway(s) in which protein is involved

KEGG

vg:1497029

Reactome

Not Available

Sequence

							MERGSRDHHRDHRDHREHRELREPPTLAFHMKSWKTINKPLKAFTKLLKENTTVTFTPQPSIIIQSAKNHLVQKLTIQAECLFLSDTEHFLTKTINNHIP
LFESFMNIISNPEVTKLYIQHDSDLYTRVLVTASDTCTQASVPCVHGQEVVRDSGKSPLRIDLDHSTVSEVLKWLSPVTKTKRSGKSDAFMAHIIVQVNP
PTIKFVTEMNELEFSNSNKVIFYDVNNMRFNLSAKNLQQALSMCAVIKTSCSLRTVAAKDCKLILTSKSTLLTVEAFLTQEQLKEESRFERMGKQDDGKG
DRNHKNEDGSALASKQETQYKITNYMVPTKNGTAGSSLFNEKEDSESDDSMHFEYSSNPKRQRCVV
						

Length

366

Alternate Sequence

Not Available

Non-standard residue

Not Available

Date of last Sequence modification

01-05-2000

Protein Existence

Inferred from homology

Amino Acid composition

Amino Acid	Count	% Frequency	Amino Acid	Count	% Frequency
Alanine (A)			Leucine (L)
Arginine (R)			Lysine (K)
Asparagine (N)			Methionine (M)
Aspartic Acid (D)			Phenylalanine (F)
Cysteine (C)			Proline (P)
Glutamine (Q)			Serine (S)
Glutamic Acid (E)			Threonine (T)
Glycine (G)			Tryptophan (W)
Histidine (H)			Tyrosine (Y)
Isoleucine (I)			Valine (V)

Sum of Absolute Deviation from Amino Acid Occurrence Frequencies

Aliphatic Index

Instability Index

Secondary Structure features

% Number of Residues in Helices	% Number of Residues in Strands	% Number of Residues in Coils

Structural Difficulty(SD) index

Role(s)

Accessory subunit of the DNA polymerase that acts to increase the processivity of polymerization.

EC

Not Available

Experimentally known GO terms

GO:0003677 ; GO:0006260 ; GO:0019079 ; GO:0030337

Subcellular Location

Not Available

Domain(s)

Not Available

Motif(s)

Not Available

Methods of 3D structure generation

Predicted/Modelled

Experimetally known structure

Not Available

Active Site(s)

Not Available

Predicted 3D Structures

Protein couldn't be modeled using I-Tasser and Raptor X because of length constraints of the software.

Experimentally known Ligand(s)

Not Available

Virtually Screened Ligands

Virtual screening has been performed using RASPD

						Million Molecules

					
Best 20 Hit molecules 
Not Available