Results | viHumans

UniProt ID

Q9IK92

Status

Reviewed

Host

Cynopterus Brachyotis (Lesser Short-nosed Fruit Bat) (Pachysoma Brachyotis) [TaxID: 58060]; Eonycteris Spelaea (Lesser Dawn Bat) (Macroglossus Spelaeus) [TaxID: 58065]; Homo Sapiens (Human) [TaxID: 9606]; Pteropus Hypomelanus (Island Flying Fox) (Variable Flying Fox) [TaxID: 9405]; Pteropus Vampyrus (Large Flying Fox) [TaxID: 132908]; Scotophilus Kuhlii (Lesser Asiatic Yellow Bat) [TaxID: 153297]; Sus Scrofa (Pig) [TaxID: 9823]

Gene Name

N[Gene ID: 920951 ]

Protein Name

Nucleoprotein (Protein N) (Nucleocapsid protein)

Organism Name

Nipah Virus

Taxonomic Lineage

Viruses> SsRNA Viruses> SsRNA Negative-strand Viruses> Mononegavirales> Paramyxoviridae> Henipavirus> Nipah Virus

RefSeq

NC_002728.1 ; AF212302.2

PubMed ID

10827955 ; 11514724 ; 11880045 ; 15663869 ; 16022778 ;

Pathways Involved

Various pathway(s) in which protein is involved

KEGG

vg:920951

Reactome

Not Available

Sequence

							MSDIFEEAASFRSYQSKLGRDGRASAATATLTTKIRIFVPATNSPELRWELTLFALDVIRSPSAAESMKVGAAFTLISMYSERPGALIRSLLNDPDIEAV
IIDVGSMVNGIPVMERRGDKAQEEMEGLMRILKTARDSSKGKTPFVDSRAYGLRITDMSTLVSAVITIEAQIWILIAKAVTAPDTAEESETRRWAKYVQQ
KRVNPFFALTQQWLTEMRNLLSQSLSVRKFMVEILIEVKKGGSAKGRAVEIISDIGNYVEETGMAGFFATIRFGLETRYPALALNEFQSDLNTIKSLMLL
YREIGPRAPYMVLLEESIQTKFAPGGYPLLWSFAMGVATTIDRSMGALNINRGYLEPMYFRLGQKSARHHAGGIDQNMANRLGLSSDQVAELAAAVQETS
AGRQESNVQAREAKFAAGGVLIGGSDQDIDEGEEPIEQSGRQSVTFKREMSISSLANSVPSSSVSTSGGTRLTNSLLNLRSRLAAKAAKEAASSNATDDP
AISNRTQGESEKKNNQDLKPAQNDLDFVRADV
						

Length

532

Alternate Sequence

Not Available

Non-standard residue

Not Available

Date of last Sequence modification

01-10-2000

Protein Existence

Evidence at protein level

Amino Acid composition

Amino Acid	Count	% Frequency	Amino Acid	Count	% Frequency
Alanine (A)			Leucine (L)
Arginine (R)			Lysine (K)
Asparagine (N)			Methionine (M)
Aspartic Acid (D)			Phenylalanine (F)
Cysteine (C)			Proline (P)
Glutamine (Q)			Serine (S)
Glutamic Acid (E)			Threonine (T)
Glycine (G)			Tryptophan (W)
Histidine (H)			Tyrosine (Y)
Isoleucine (I)			Valine (V)

Sum of Absolute Deviation from Amino Acid Occurrence Frequencies

Aliphatic Index

Instability Index

Secondary Structure features

% Number of Residues in Helices	% Number of Residues in Strands	% Number of Residues in Coils

Structural Difficulty(SD) index

Role(s)

Encapsidates the genome protecting it from nucleases. The encapsidated genomic RNA is termed the nucleocapsid (NC) and serves as template for transcription and replication (By similarity).

EC

Not Available

Experimentally known GO terms

GO:0003723 ; GO:0005198 ; GO:0019013 ; GO:0019029 ; GO:0030430 ;
GO:0039689 ; GO:0039697

Subcellular Location

Virion. Host cytoplasm .

Domain(s)

Not Available

Motif(s)

Not Available

Methods of 3D structure generation

X-ray crystallography (1)

Experimetally known structure

4CO6

Active Site(s)

Not Available

Predicted 3D Structures

Protein couldn't be modeled using I-Tasser and Raptor X because of length constraints of the software.

Experimentally known Ligand(s)

Not Available

Virtually Screened Ligands

Virtual screening has been performed using RASPD

						Million Molecules

					
Best 20 Hit molecules 
Not Available