Results | viHumans

UniProt ID

Q9ENK7

Status

Reviewed

Host

Callospermophilus Lateralis (Golden-mantled Ground Squirrel) (Spermophilus Lateralis) [TaxID: 76772]; Dermacentor Andersoni (Rocky Mountain Wood Tick) [TaxID: 34620]; Erethizon Dorsatum (North American Porcupine) [TaxID: 34844]; Homo Sapiens (Human) [TaxID: 9606]; Neotoma Cinerea (Bushy-tailed Woodrat) [TaxID: 105147]; Peromyscus Maniculatus (North American Deer Mouse) [TaxID: 10042]

Gene Name

Not Available

Protein Name

Microtubule-associated protein VP10

Organism Name

Colorado Tick Fever Virus (strain USA/Florio N-7180) (CTFV)

Taxonomic Lineage

Viruses> DsRNA Viruses> Reoviridae> Spinareovirinae> Coltivirus> Colorado Tick Fever Virus (CTFV)> Colorado Tick Fever Virus (strain USA/Florio N-7180) (CTFV)

RefSeq

NC_004180.1 ;  U53227.1 ;  AF000720.1 ;  NC_004181.1 ;  U53227.1 ;  AF133428.1 ;  NC_004182.1 ;
U53227.1 ;  AF139758.1 ;  NC_004183.1 ;  U53227.1 ;  AF139759.1 ;  NC_004184.1 ;  U53227.1 ;
AF139760.1 ;  NC_004185.1 ;  U53227.1 ;  AF139761.1 ;  NC_004186.1 ;  U53227.1 ;  AF139762.1 ;
7:NC_004187.1 ;  U53227.1 ;  AF139763.1 ;  NC_004188.1 ;  U53227.1 ;  AF139764.1 ;  NC_004189.1 ;
U53227.1 ;  AF139765.1 ;  NC_004191.1 ;  U53227.1 ;  NC_004190.1 ;  U53227.1 ;  U72694.1

PubMed ID

10891382

Pathways Involved

Various pathway(s) in which protein is involved

KEGG

vg:993317

Reactome

Not Available

Sequence

							MLKRPAYYNIFLLPTGRRLAKTYNILENLITLPKTDWKLYETIEQKLKWMIQEYRSDWRDRLSHHERYGMKVRLTYRSESERTKLEEKITDLVISHGKKA
STVHFCTRESYKGRVRANQILILLEPEGLGEVEGLTVRAEGNWMSLVTHCLFILGSTLTCFGFVDPARGCRFNLLPYIKTLHPNDKWLLDLQASWRLEYG
VSRSIEEGALYDFFAESHTLYAVRTWPGCEKYLGALEAFVGRLAVLPAQVLTSKEHDFQSKLMSKAKKTGFHYLYYLVSFTMKTSLTDRIVKEALATVKV
FSFVVGRDHLPAVGVYSGEDFSKQFLSMAVGTMDTPSRYAITIVSGMQVDVDVKSVTGIASFKDGTQHTIVDEILLQPARLVLLGRKGGGKSRLSKIFSE
LGYNVLDSDTYGKVLTLVADRGEDGLDDALKKFVRLTPDERKAVPSIFETEMDRLCEVFGSRGLRPYAQRCQQQAGRLHWELYAAFQEFYDRTIRVITPD
KFRFAYFAELERGGFDDNGLTFSPELKTVVFVHSMPELFEAMGGCVAEIVPTHSTRLAILLRGQGLSVNAELHLHDFYVALNQNGARKVSLGWLVHALNE
LLKMR
						

Length

605

Alternate Sequence

Not Available

Non-standard residue

Not Available

Date of last Sequence modification

01-03-2001

Protein Existence

Inferred from homology

Amino Acid composition

Amino Acid	Count	% Frequency	Amino Acid	Count	% Frequency
Alanine (A)			Leucine (L)
Arginine (R)			Lysine (K)
Asparagine (N)			Methionine (M)
Aspartic Acid (D)			Phenylalanine (F)
Cysteine (C)			Proline (P)
Glutamine (Q)			Serine (S)
Glutamic Acid (E)			Threonine (T)
Glycine (G)			Tryptophan (W)
Histidine (H)			Tyrosine (Y)
Isoleucine (I)			Valine (V)

Sum of Absolute Deviation from Amino Acid Occurrence Frequencies

Aliphatic Index

Instability Index

Secondary Structure features

% Number of Residues in Helices	% Number of Residues in Strands	% Number of Residues in Coils

Structural Difficulty(SD) index

Role(s)

Minor inner capsid component. Displays NTPase and RNA 5'-triphosphatase (RTPase) activities. May function as a cofactor of polymerase VP1. Associates with microtubules and plays a role in the formation, structural organization and morphology of viral inclusions, where the assembly of cores and the replication of viral RNA occur (By similarity).

EC

Not Available

Experimentally known GO terms

GO:0019012 ; GO:0030430 ; GO:0044163

Subcellular Location

Virion . Host cytoplasm, host cytoskeleton .

Domain(s)

Not Available

Motif(s)

Not Available

Methods of 3D structure generation

Predicted/Modelled

Experimetally known structure

Not Available

Active Site(s)

Not Available

Predicted 3D Structures

Protein couldn't be modeled using I-Tasser and Raptor X because of length constraints of the software.

Experimentally known Ligand(s)

Not Available

Virtually Screened Ligands

Virtual screening has been performed using RASPD

						Million Molecules

					
Best 20 Hit molecules 
Not Available