Reviewed
Homo Sapiens (Human) [TaxID: 9606]
Not Available
Inner capsid protein VP2
Rotavirus B (isolate RVB/Human/China/ADRV/1982) (RV-B) (Rotavirus B (isolate Adult Diarrhea Rotavirus))
Viruses> DsRNA Viruses> Reoviridae> Sedoreovirinae> Rotavirus> Rotavirus B> Rotavirus B (isolate RVB/Human/China/ADRV/1982) (RV-B) (Rotavirus B (isolate Adult Diarrhea Rotavirus))
KU562873.1 ; KU562874.1 ; KU562875.1 ; KU562876.1 ; KU562877.1 ; KU562878.1 ; KU562879.1 ;
KU562880.1 ; KU562881.1 ; KU562882.1 ; KU562883.1
KU562880.1 ; KU562881.1 ; KU562882.1 ; KU562883.1
Various pathway(s) in which protein is involved
Not Available
Not Available
MDSTVLVESAKTNIHGVDSKAEKQTIFDQLISDIKSQTDGQIPDEVLPDLQQLAEINGLTFEYKPKEKLSIMDHPDPTSVLSQDVFQIRTILSKTLFVDV
ENEDYSVYIPNDTAKLTPVLIDARPIQTYQPKALMHKDTAILPSHRDEISDQYGTDEILFDSHMFNDISQAQIRDFDTYILDKSIQIQNTLPNLEFISSL
EKEVNPFNIHNTLCLNFGQKEYYNIIADRTNLSFQQRRQSVQFDNVIVDGVARTARVSLRLHPFDSQLLDIVRFNVIQDQPLADTLMEYQLVAADGFVAT
PKFRVDRDARLIADVRSPVMARLCELSPFFHRTRILSSMTDFTPLWKVNVFSSSIDNAKDAIYRMAEISFTVADATTSALASVNVASAQQTLLTLLNLSL
FRFEIDPTGSQSNFGSAVSAALMLIVFPTDEQSMSNITFDNLCNLVFNELIAWTVDRPTFVKRTGMTNAFEANVNIGGGNMTRDIIAYMRFVLLRRPWAV
FQRTYDDRYVSDIMVPNIDEANVNDQCYVAINNLFNGLIQAAQRNPNPGRQIAATSFRKLLKSMKDSCCNRIIPLIRLLKYNIERIARVYRFFPYTADLV
HVIPAFRDERLRVKVPVSGMLSIALGINKAPDSFDWYNLLKFADVVRTKNFADQSLESIMVHALIRNDINPARSKKDYIQQNIKPATNVVASLSKLPSAT
FTTILADRMLNNEIRRTQSYVVTNRIRDAVRAAFEHVPTAEHGIAKGALLLPIPQNFQRSSVYVRKDNILYDPPVGVDRFNLSDLLDGRFYQGLINRVQN
MAPFVISGPLQVKPSDASAIESVTSAYLTMSSPYDACVRPEDLRHNRVVHPPTVDYFSDASITRPNTQFEQLMSKTSVFVIDAPRLIVQNDATVYTFDYK
DIQLTTSVVDKLEFTSVKTPDVTLFNGMLVYED
ENEDYSVYIPNDTAKLTPVLIDARPIQTYQPKALMHKDTAILPSHRDEISDQYGTDEILFDSHMFNDISQAQIRDFDTYILDKSIQIQNTLPNLEFISSL
EKEVNPFNIHNTLCLNFGQKEYYNIIADRTNLSFQQRRQSVQFDNVIVDGVARTARVSLRLHPFDSQLLDIVRFNVIQDQPLADTLMEYQLVAADGFVAT
PKFRVDRDARLIADVRSPVMARLCELSPFFHRTRILSSMTDFTPLWKVNVFSSSIDNAKDAIYRMAEISFTVADATTSALASVNVASAQQTLLTLLNLSL
FRFEIDPTGSQSNFGSAVSAALMLIVFPTDEQSMSNITFDNLCNLVFNELIAWTVDRPTFVKRTGMTNAFEANVNIGGGNMTRDIIAYMRFVLLRRPWAV
FQRTYDDRYVSDIMVPNIDEANVNDQCYVAINNLFNGLIQAAQRNPNPGRQIAATSFRKLLKSMKDSCCNRIIPLIRLLKYNIERIARVYRFFPYTADLV
HVIPAFRDERLRVKVPVSGMLSIALGINKAPDSFDWYNLLKFADVVRTKNFADQSLESIMVHALIRNDINPARSKKDYIQQNIKPATNVVASLSKLPSAT
FTTILADRMLNNEIRRTQSYVVTNRIRDAVRAAFEHVPTAEHGIAKGALLLPIPQNFQRSSVYVRKDNILYDPPVGVDRFNLSDLLDGRFYQGLINRVQN
MAPFVISGPLQVKPSDASAIESVTSAYLTMSSPYDACVRPEDLRHNRVVHPPTVDYFSDASITRPNTQFEQLMSKTSVFVIDAPRLIVQNDATVYTFDYK
DIQLTTSVVDKLEFTSVKTPDVTLFNGMLVYED
933
Not Available
Not Available
01-11-1996
Inferred from homology
| Amino Acid | Count | % Frequency | Amino Acid | Count | % Frequency |
|---|---|---|---|---|---|
| Alanine (A) | Leucine (L) | ||||
| Arginine (R) | Lysine (K) | ||||
| Asparagine (N) | Methionine (M) | ||||
| Aspartic Acid (D) | Phenylalanine (F) | ||||
| Cysteine (C) | Proline (P) | ||||
| Glutamine (Q) | Serine (S) | ||||
| Glutamic Acid (E) | Threonine (T) | ||||
| Glycine (G) | Tryptophan (W) | ||||
| Histidine (H) | Tyrosine (Y) | ||||
| Isoleucine (I) | Valine (V) |
| % Number of Residues in Helices | % Number of Residues in Strands | % Number of Residues in Coils |
|---|---|---|
Inner capsid protein that self-assembles to form an icosahedral capsid with a T=2 symmetry, which consists of 120 copies of VP2, with channels at each of its five-fold vertices. This capsid constitutes the innermost concentric layer of the viral mature particle. It encapsidates the polymerase VP1, the capping enzyme VP3 and the genomic dsRNA, thereby defining the core. The innermost VP2 capsid and the intermediate VP6 capsid remain intact following cell entry to protect the dsRNA from degradation and to prevent unfavorable antiviral responses in the host cell during all the replication cycle of the virus. Nascent transcripts are transcribed within the structural confines of this double-layered particle (DLP) and are extruded through the channels formed by VP2 N-termini. VP2 is required for the replicase activity of VP1 polymerase. Probably recruits a copy of a VP1-VP3 complex, potentially along with a segment of plus-strand RNA, as a decamer of VP2 assembles. May activate the autoinhibited VP1/RNA complex to coordinate packaging and genome replication.
Not Available
Virion . Note=Inner capsid protein. Also found in spherical cytoplasmic structures, called virus factories, that appear early after infection and are the site of viral replication and packaging. .
Not Available
Not Available
Predicted/Modelled
Not Available
Not Available
Protein couldn't be modeled using I-Tasser and Raptor X because of length constraints of the software.
Not Available
- Million Molecules
Best 20 Hit molecules
Not Available