Results | viHumans

UniProt ID

Q6UY65

Status

Reviewed

Host

Chlorocebus Aethiops (Green Monkey) (Cercopithecus Aethiops) [TaxID: 9534]; Homo Sapiens (Human) [TaxID: 9606]; Rousettus Aegyptiacus (Egyptian Rousette) (Egyptian Fruit Bat) [TaxID: 9407]

Gene Name

VP30

Protein Name

Minor nucleoprotein VP30 (Transcription activator VP30)

Organism Name

Lake Victoria Marburgvirus (strain Ozolin-75) (MARV) (Marburg Virus (strain South Africa/Ozolin/1975))

Taxonomic Lineage

Viruses> SsRNA Viruses> SsRNA Negative-strand Viruses> Mononegavirales> Filoviridae> Marburgvirus> Marburg Marburgvirus> Lake Victoria Marburgvirus (strain Ozolin-75) (MARV) (Marburg Virus (strain South Africa/Ozolin/1975))

RefSeq

NC_001608.3 ; DQ217792.1

PubMed ID

Pathways Involved

Various pathway(s) in which protein is involved

KEGG

Not Available

Reactome

Not Available

Sequence

							MQQPRGRSRTRNHQAIPSIYHETQLPSKPNYTNHHPRARSMSSTRSSTESSPTNHIPRARPPSTFNLSKPPPPPKDMCRNMKIGLPCTDLTCNRDHDLDN
LTNRELLLLMARKMLPNTDKVFKSPQDCGSPSLSKGLSKDKQEQTKDVLTLENLGHILNYLHRSEIGKLDETSLRAALSLTCAGIRKTNRSLINTMTELH
INHENLPQDQNGVIKQTYTGIHLDKGGQFEAALWQGWDKRSISLFVQAALYVMNNIPCESSISVQASYDHFILPQSQGKGQ
						

Length

281

Alternate Sequence

Not Available

Non-standard residue

Not Available

Date of last Sequence modification

05-07-2004

Protein Existence

Inferred from homology

Amino Acid composition

Amino Acid	Count	% Frequency	Amino Acid	Count	% Frequency
Alanine (A)			Leucine (L)
Arginine (R)			Lysine (K)
Asparagine (N)			Methionine (M)
Aspartic Acid (D)			Phenylalanine (F)
Cysteine (C)			Proline (P)
Glutamine (Q)			Serine (S)
Glutamic Acid (E)			Threonine (T)
Glycine (G)			Tryptophan (W)
Histidine (H)			Tyrosine (Y)
Isoleucine (I)			Valine (V)

Sum of Absolute Deviation from Amino Acid Occurrence Frequencies

Aliphatic Index

Instability Index

Secondary Structure features

% Number of Residues in Helices	% Number of Residues in Strands	% Number of Residues in Coils

Structural Difficulty(SD) index

Role(s)

Acts as a transcription anti-termination factor immediately after transcription initiation, but does not affect transcription elongation. This function has been found to be dependent on the formation of an RNA secondary structure at the transcription start site of the first gene (By similarity).

EC

Not Available

Experimentally known GO terms

GO:0006351 ; GO:0019013 ; GO:0030430 ; GO:0046872

Subcellular Location

Virion. Host cytoplasm . Note=Tightly bound in the nucleocapsid.

Domain(s)

Not Available

Motif(s)

Not Available

Methods of 3D structure generation

Predicted/Modelled

Experimetally known structure

Not Available

Active Site(s)

Not Available

Predicted 3D Structures

Protein couldn't be modeled using I-Tasser and Raptor X because of length constraints of the software.

Experimentally known Ligand(s)

Not Available

Virtually Screened Ligands

Virtual screening has been performed using RASPD

						Million Molecules

					
Best 20 Hit molecules 
Not Available