Results | viHumans

UniProt ID

Q0H8C5

Status

Reviewed

Host

Homo Sapiens (Human) [TaxID: 9606]

Gene Name

Not Available

Protein Name

Non-structural protein 1 (NSP1)

Organism Name

Rotavirus X (isolate RVX/Human/Bangladesh/NADRV-B219/2002/GXP[X]) (RV ADRV-N) (Rotavirus (isolate Novel Adult Diarrhea Rotavirus-B219))

Taxonomic Lineage

Viruses> DsRNA Viruses> Reoviridae> Sedoreovirinae> Rotavirus> Unclassified Rotaviruses> Rotavirus X (isolate RVX/Human/Bangladesh/NADRV-B219/2002/GXP[X]) (RV ADRV-N) (Rotavirus (isolate Novel Adult Diarrhea Rotavirus-B219))

RefSeq

Not Available

PubMed ID

16900303

Pathways Involved

Various pathway(s) in which protein is involved

KEGG

Not Available

Reactome

Not Available

Sequence

							MMSIQRATQINRQFDYMSIKELWMAKFPLHKPGDCLDMFKNGNYTGLTMECIQRTKASKKNTIFHIKSDFNSTDYDEPPISGFKMFTQHCCQRIDEHFCG
ALHPVISNIEFEQNQLRTRPQVASEFNLFIPCGIKNLKIESGEDPTWIVGTKFRKCMCLKPVMVAATIIGTPVNKNLITFCSSDYIQVIVNRNREGSCGI
CMGNTSTYEACGNWTNETWGEEFSLDLKLCYKCTPVAFIFSLMMSTGHKPYVSKRQFEENRRKWERVLNYKICEENLDSHLACANHENVYKSIKKYEFFD
SIWVYHLANSSWVRDLTRECIESNPGPNYIQLLNEHSQRYGFIQPTYEIIAVVSDGHHSYQCTCYYKDTKTQSIGPSKKNAKHQAAEQMFRHQCF
						

Length

395

Alternate Sequence

Not Available

Non-standard residue

Not Available

Date of last Sequence modification

03-10-2006

Protein Existence

Predicted

Amino Acid composition

Amino Acid	Count	% Frequency	Amino Acid	Count	% Frequency
Alanine (A)			Leucine (L)
Arginine (R)			Lysine (K)
Asparagine (N)			Methionine (M)
Aspartic Acid (D)			Phenylalanine (F)
Cysteine (C)			Proline (P)
Glutamine (Q)			Serine (S)
Glutamic Acid (E)			Threonine (T)
Glycine (G)			Tryptophan (W)
Histidine (H)			Tyrosine (Y)
Isoleucine (I)			Valine (V)

Sum of Absolute Deviation from Amino Acid Occurrence Frequencies

Aliphatic Index

Instability Index

Secondary Structure features

% Number of Residues in Helices	% Number of Residues in Strands	% Number of Residues in Coils

Structural Difficulty(SD) index

Role(s)

Not Available

EC

Not Available

Experimentally known GO terms

GO:0003723

Subcellular Location

Not Available

Domain(s)

DOMAIN 328 395 DRBM.

Motif(s)

MOTIF 320 327 Putative autoproteolytic cleavage motif.

Methods of 3D structure generation

Predicted/Modelled

Experimetally known structure

Not Available

Active Site(s)

Not Available

Predicted 3D Structures

Protein couldn't be modeled using I-Tasser and Raptor X because of length constraints of the software.

Experimentally known Ligand(s)

Not Available

Virtually Screened Ligands

Virtual screening has been performed using RASPD

						Million Molecules

					
Best 20 Hit molecules 
Not Available