Results | viHumans

UniProt ID

Q0H8C1

Status

Reviewed

Host

Homo Sapiens (Human) [TaxID: 9606]

Gene Name

Not Available

Protein Name

Non-structural protein 3 (NSP3) (NCVP4) (Non-structural RNA-binding protein 34) (NS34)

Organism Name

Rotavirus X (isolate RVX/Human/Bangladesh/NADRV-B219/2002/GXP[X]) (RV ADRV-N) (Rotavirus (isolate Novel Adult Diarrhea Rotavirus-B219))

Taxonomic Lineage

Viruses> DsRNA Viruses> Reoviridae> Sedoreovirinae> Rotavirus> Unclassified Rotaviruses> Rotavirus X (isolate RVX/Human/Bangladesh/NADRV-B219/2002/GXP[X]) (RV ADRV-N) (Rotavirus (isolate Novel Adult Diarrhea Rotavirus-B219))

RefSeq

Not Available

PubMed ID

16900303

Pathways Involved

Various pathway(s) in which protein is involved

KEGG

Not Available

Reactome

Not Available

Sequence

							MAELVCDALATLTRNTYGNNDESAKFCRMFRAMIRDSGLYSNIENWRAAFYRDRLPKRMSHSTVSIQLDNLEREVLKIRAEGFCQGYTRKERTLNAFDLG
DDGKGNTIIKPTTHLSSIILQNSYNSAFKLPKIPDGLLEKTRCELEEEKKNNDVLKQKIKELENTISQLENFENEAKASEFVLEHLKFTNESLRIQRDEA
QICLVGLCNKFGLQCEIDNSIRVTESDKKGKRKGRKNRRTEVSFGAPGHNLTDQINALSDVE
						

Length

262

Alternate Sequence

Not Available

Non-standard residue

Not Available

Date of last Sequence modification

03-10-2006

Protein Existence

Inferred from homology

Amino Acid composition

Amino Acid	Count	% Frequency	Amino Acid	Count	% Frequency
Alanine (A)			Leucine (L)
Arginine (R)			Lysine (K)
Asparagine (N)			Methionine (M)
Aspartic Acid (D)			Phenylalanine (F)
Cysteine (C)			Proline (P)
Glutamine (Q)			Serine (S)
Glutamic Acid (E)			Threonine (T)
Glycine (G)			Tryptophan (W)
Histidine (H)			Tyrosine (Y)
Isoleucine (I)			Valine (V)

Sum of Absolute Deviation from Amino Acid Occurrence Frequencies

Aliphatic Index

Instability Index

Secondary Structure features

% Number of Residues in Helices	% Number of Residues in Strands	% Number of Residues in Coils

Structural Difficulty(SD) index

Role(s)

May play a role in stimulating the translation of viral mRNAs.

EC

Not Available

Experimentally known GO terms

GO:0003723 ; GO:0006417 ; GO:0030430

Subcellular Location

Host cytoplasm .

Domain(s)

Not Available

Motif(s)

Not Available

Methods of 3D structure generation

Predicted/Modelled

Experimetally known structure

Not Available

Active Site(s)

Not Available

Predicted 3D Structures

Protein couldn't be modeled using I-Tasser and Raptor X because of length constraints of the software.

Experimentally known Ligand(s)

Not Available

Virtually Screened Ligands

Virtual screening has been performed using RASPD

						Million Molecules

					
Best 20 Hit molecules 
Not Available