Reviewed
Homo Sapiens (Human) [TaxID: 9606]
TRM1 UL28[Gene ID: 1487313 ]
Tripartite terminase subunit 1
Human Herpesvirus 2 (strain HG52) (HHV-2) (Human Herpes Simplex Virus 2)
Viruses> DsDNA Viruses> No RNA Stage> Herpesvirales> Herpesviridae> Alphaherpesvirinae> Simplexvirus> Human Herpesvirus 2 (HHV-2) (Human Herpes Simplex Virus 2)> Human Herpesvirus 2 (strain HG52) (HHV-2) (Human Herpes Simplex Virus 2)
Not Available
Various pathway(s) in which protein is involved
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MAAAPPAAVSEPTAARQKLLALLGQVQTYVFQLELLRRCDPQIGLGKLAQLKLNALQVRVLRRHLRPGLEAQAAAFLTPLSVTLELLLEYAWREGERLLG
HLETFATTGDVSAFFTETMGLARPCPYHQQIRLQTYGGDVRMELCFLHDVENFLKQLNYCHLITPPSGATAALERVREFMVAAVGSGLIVPPELSDPSHP
CAVCFEELCVTANQGATIARRLADRICNHVTQQAQVRLDANELRRYLPHAAGLSDAARARALCVLDQALARTAAGGGARAGPPPADSSSVREEADALLEA
HDVFQATTPGLYAISELRFWLASGDRARHSTMDAFADNLNALAQRELQQETAAVAVELALFGRRAEHFDRAFGGHLAALDMVDALIIGGQATSPDDQIEA
LIRACYDHHLTTPLLRRLVSPEQCDEEALRRVLARLGAGGATGGAEEEEPRAAAEEGGRRRGAGTPASEDGERGPEPGAQGPESWGDIATRAAADVRERR
RLYADRLTKRSLASLGRCVREQRGELEKMLRVSVHGEVLPATFAAVANGFAARARFCALTAGAGTVIDNRAAPGVFDAHRFMRASLLRHQVDPALLPSIT
HRFFELVNGPLFDHSTHSFAQPPNTALYYSVENVGLLPHLKEELARFIMGAGGSGADWAVSEFQKFYCFDGVSGITPTQRAAWRYIRELIIATTLFASVY
RCGELELRRPDCSRPTSEGLYRYPPGVYLTYNSDCPLVAIVESGPDGCIGPRSVVVYDRDVFSILYSVLQHLAPRLAGGGSDAPP
HLETFATTGDVSAFFTETMGLARPCPYHQQIRLQTYGGDVRMELCFLHDVENFLKQLNYCHLITPPSGATAALERVREFMVAAVGSGLIVPPELSDPSHP
CAVCFEELCVTANQGATIARRLADRICNHVTQQAQVRLDANELRRYLPHAAGLSDAARARALCVLDQALARTAAGGGARAGPPPADSSSVREEADALLEA
HDVFQATTPGLYAISELRFWLASGDRARHSTMDAFADNLNALAQRELQQETAAVAVELALFGRRAEHFDRAFGGHLAALDMVDALIIGGQATSPDDQIEA
LIRACYDHHLTTPLLRRLVSPEQCDEEALRRVLARLGAGGATGGAEEEEPRAAAEEGGRRRGAGTPASEDGERGPEPGAQGPESWGDIATRAAADVRERR
RLYADRLTKRSLASLGRCVREQRGELEKMLRVSVHGEVLPATFAAVANGFAARARFCALTAGAGTVIDNRAAPGVFDAHRFMRASLLRHQVDPALLPSIT
HRFFELVNGPLFDHSTHSFAQPPNTALYYSVENVGLLPHLKEELARFIMGAGGSGADWAVSEFQKFYCFDGVSGITPTQRAAWRYIRELIIATTLFASVY
RCGELELRRPDCSRPTSEGLYRYPPGVYLTYNSDCPLVAIVESGPDGCIGPRSVVVYDRDVFSILYSVLQHLAPRLAGGGSDAPP
785
Not Available
Not Available
01-05-1997
Inferred from homology
Amino Acid | Count | % Frequency | Amino Acid | Count | % Frequency |
---|---|---|---|---|---|
Alanine (A) | Leucine (L) | ||||
Arginine (R) | Lysine (K) | ||||
Asparagine (N) | Methionine (M) | ||||
Aspartic Acid (D) | Phenylalanine (F) | ||||
Cysteine (C) | Proline (P) | ||||
Glutamine (Q) | Serine (S) | ||||
Glutamic Acid (E) | Threonine (T) | ||||
Glycine (G) | Tryptophan (W) | ||||
Histidine (H) | Tyrosine (Y) | ||||
Isoleucine (I) | Valine (V) |
% Number of Residues in Helices | % Number of Residues in Strands | % Number of Residues in Coils |
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Component of the molecular motor that translocates viral genomic DNA in empty capsid during DNA packaging. Forms a tripartite terminase complex together with TRM2 and TRM3 in the host cytoplasm. Once the complex reaches the host nucleus, it interacts with the capsid portal vertex. This portal forms a ring in which genomic DNA is translocated into the capsid. TRM1 carries an endonuclease activity that plays an important role for the cleavage of concatemeric viral DNA into unit length genomes.
Not Available
Host nucleus . Note=Found associated with the external surface of the viral capsid during assembly and DNA packaging, but seems absent in extracellular mature virions. .
Not Available
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Predicted/Modelled
Not Available
Not Available
Protein couldn't be modeled using I-Tasser and Raptor X because of length constraints of the software.
Not Available
- Million Molecules
Best 20 Hit molecules
Not Available