Results | viHumans

UniProt ID

O93214

Status

Reviewed

Host

Callospermophilus Lateralis (Golden-mantled Ground Squirrel) (Spermophilus Lateralis) [TaxID: 76772]; Dermacentor Andersoni (Rocky Mountain Wood Tick) [TaxID: 34620]; Erethizon Dorsatum (North American Porcupine) [TaxID: 34844]; Homo Sapiens (Human) [TaxID: 9606]; Neotoma Cinerea (Bushy-tailed Woodrat) [TaxID: 105147]; Peromyscus Maniculatus (North American Deer Mouse) [TaxID: 10042]

Gene Name

Not Available

Protein Name

Structural protein VP9

Organism Name

Colorado Tick Fever Virus (strain USA/Florio N-7180) (CTFV)

Taxonomic Lineage

Viruses> DsRNA Viruses> Reoviridae> Spinareovirinae> Coltivirus> Colorado Tick Fever Virus (CTFV)> Colorado Tick Fever Virus (strain USA/Florio N-7180) (CTFV)

RefSeq

NC_004180.1 ;  U53227.1 ;  AF000720.1 ;  NC_004181.1 ;  U53227.1 ;  AF133428.1 ;  NC_004182.1 ;
U53227.1 ;  AF139758.1 ;  NC_004183.1 ;  U53227.1 ;  AF139759.1 ;  NC_004184.1 ;  U53227.1 ;
AF139760.1 ;  NC_004185.1 ;  U53227.1 ;  AF139761.1 ;  NC_004186.1 ;  U53227.1 ;  AF139762.1 ;
7:NC_004187.1 ;  U53227.1 ;  AF139763.1 ;  NC_004188.1 ;  U53227.1 ;  AF139764.1 ;  NC_004189.1 ;
U53227.1 ;  AF139765.1 ;  NC_004191.1 ;  U53227.1 ;  NC_004190.1 ;  U53227.1 ;  U72694.1

PubMed ID

9367376 ; 15269364

Pathways Involved

Various pathway(s) in which protein is involved

KEGG

vg:993307

Reactome

Not Available

Sequence

							MFGYLQLINPTTDIYIKDYGNFSGIVAHQAYDPVRRDHMLLRSMKLHFGPNSKLLWLGDFHAITLSHANMIFGASSVGFKGVNVSTLPPDTLTTGIRPRP
VVTMDFAQLKGFYSDLAQKEDYIMYFHDMVKFVSQTGGAPVSLRDVFLWISESVTGPVVIRTDCVTGCNNLWPSGSGHFYFPYERKTKFRYGTFVECGKN
LTWSEGPQWDVKSYVVGFNFVTRANSLLGGGFDEVCYRLMMQAEVPRQVAEQGLTLEQAVRKLASEHHMSRPQLTSRRVPGITDQTKYEAYVVCGPFRTG
QVVADSLQMAEDLAWREMLGTLKTLIHDEARQTKGCC
						

Length

337

Alternate Sequence

Not Available

Non-standard residue

Not Available

Date of last Sequence modification

01-11-1998

Protein Existence

Predicted

Amino Acid composition

Amino Acid	Count	% Frequency	Amino Acid	Count	% Frequency
Alanine (A)			Leucine (L)
Arginine (R)			Lysine (K)
Asparagine (N)			Methionine (M)
Aspartic Acid (D)			Phenylalanine (F)
Cysteine (C)			Proline (P)
Glutamine (Q)			Serine (S)
Glutamic Acid (E)			Threonine (T)
Glycine (G)			Tryptophan (W)
Histidine (H)			Tyrosine (Y)
Isoleucine (I)			Valine (V)

Sum of Absolute Deviation from Amino Acid Occurrence Frequencies

Aliphatic Index

Instability Index

Secondary Structure features

% Number of Residues in Helices	% Number of Residues in Strands	% Number of Residues in Coils

Structural Difficulty(SD) index

Role(s)

Not Available

EC

Not Available

Experimentally known GO terms

GO:0019028 ; GO:0030430

Subcellular Location

Virion . Host cytoplasm .

Domain(s)

Not Available

Motif(s)

Not Available

Methods of 3D structure generation

Predicted/Modelled

Experimetally known structure

Not Available

Active Site(s)

Not Available

Predicted 3D Structures

Protein couldn't be modeled using I-Tasser and Raptor X because of length constraints of the software.

Experimentally known Ligand(s)

Not Available

Virtually Screened Ligands

Virtual screening has been performed using RASPD

						Million Molecules

					
Best 20 Hit molecules 
Not Available