Results | viHumans

UniProt ID

F5HBX1

Status

Reviewed

Host

Homo Sapiens (Human) [TaxID: 9606]

Gene Name

UL146[Gene ID: 3077566 ]

Protein Name

Chemokine vCXCL1

Organism Name

Human Cytomegalovirus (strain Merlin) (HHV-5) (Human Herpesvirus 5)

Taxonomic Lineage

Viruses> DsDNA Viruses> No RNA Stage> Herpesvirales> Herpesviridae> Betaherpesvirinae> Cytomegalovirus> Human Cytomegalovirus (HHV-5) (Human Herpesvirus 5)> Human Cytomegalovirus (strain Merlin) (HHV-5) (Human Herpesvirus 5)

RefSeq

Not Available

PubMed ID

15105547 ; 10449781 ; 20044480

Pathways Involved

Various pathway(s) in which protein is involved

KEGG

vg:3077566

Reactome

Not Available

Sequence

							MRLIFGALIISLTYMYYYEVHGTELRCKCLDGKKLPPKTIMLGNFWFHRESGGPRCNNNEYFLYLGGGKKHGPGVCLSPHHPFSKWLDKRNDNRWYNVNV
TRQPERGPGKITVTLVGLKE
						

Length

120

Alternate Sequence

Not Available

Non-standard residue

Not Available

Date of last Sequence modification

28-06-2011

Protein Existence

Evidence at protein level

Amino Acid composition

Amino Acid	Count	% Frequency	Amino Acid	Count	% Frequency
Alanine (A)			Leucine (L)
Arginine (R)			Lysine (K)
Asparagine (N)			Methionine (M)
Aspartic Acid (D)			Phenylalanine (F)
Cysteine (C)			Proline (P)
Glutamine (Q)			Serine (S)
Glutamic Acid (E)			Threonine (T)
Glycine (G)			Tryptophan (W)
Histidine (H)			Tyrosine (Y)
Isoleucine (I)			Valine (V)

Sum of Absolute Deviation from Amino Acid Occurrence Frequencies

Aliphatic Index

Instability Index

Secondary Structure features

% Number of Residues in Helices	% Number of Residues in Strands	% Number of Residues in Coils

Structural Difficulty(SD) index

Role(s)

Acts as a functional chemokine, inducing calcium mobilization, chemotaxis, and degranulation of neutrophils. Contributes to the induction of neutrophil chemotaxis by interacting with host CXCR1 and CXCR2 receptors.

EC

Not Available

Experimentally known GO terms

GO:0005576 ; GO:0006955 ; GO:0008009 ; GO:0030683 ; GO:0039553

Subcellular Location

Not Available

Domain(s)

Not Available

Motif(s)

Not Available

Methods of 3D structure generation

Predicted/Modelled

Experimetally known structure

Not Available

Active Site(s)

Not Available

Predicted 3D Structures

Protein couldn't be modeled using I-Tasser and Raptor X because of length constraints of the software.

Experimentally known Ligand(s)

Not Available

Virtually Screened Ligands

Virtual screening has been performed using RASPD

						Million Molecules

					
Best 20 Hit molecules 
Not Available