|
Menu Item
|
Description
|
|---|---|
| Add/Remove Explicit Hydrogens | Switches explicit H atoms to implicit ones and vica versa. Explicit hydrogens are displayed with atoms joining its neighbor while implicit hydrogens are displayed by atom symbols only. |
| Add/Remove Map Atoms | Adding atom maps is an automatic assignment of map numbers to all selected atoms of a reaction by using the automapper tool. |
| Add/Remove Data | Attach/Remove data like stoichiometry coefficient to the molecule. |
| Add/Remove Absolute Stereo (CHIRAL) | Sets/Removes chiral flag for the molecule. |
| Add Multi-Center | Add a multi-center attachment point representing a group of atoms. |
| Add Position Variation Bond | Create a variable point of attachment to represent a connection point to a group of atoms. |
| Link Node | Specifies query structures containing rings or chains of variable size. |
| R-Logic | Allows setting additional R-group conditions such as occurrence, rest H and if-then expressions to R-groups in the R-logic dialog. |
Transformation > Drag Selection |
The selected part of the molecule can be moved by dragging the mark box with your mouse or with the proper arrow keys. |
Transformation > Rotate in 2D |
The selection can be rotated in the plane of the canvas with changing coordinates. |
Transformation > Rotate in 3D |
The selected part of the molecule will be rotated according to the chosen rotation mode. |
Transformation > Switch Transformation (space) |
You can switch between dragging or 3D rotating the selected molecular parts by hitting the space bar. |
Transformation > Flip |
Flips the structure on the canvas. The submenu allows you to choose horizontally or vertically. |
Transformation > Mirror |
Flips the object horizontally, inverting tetrahedral stereochemistry. The submenu allows you to choose horizontally or vertically. |
Transformation > Invert |
Reflects the selected fragment(s) through the geometric or arbitrary center. |
Document Style |
Change atom and bond drawing properties. |
Add To My Templates |
Adds the selected structure to the My Templates group located in the Template Library and on the Advanced Templates Toolbar. |