MarvinSketch : Atom query properties


Adding query properties to structures.

Name
Description
.H+ Increase number of total hydrogens (total number of hydrogen substituents)
.H- Decrease number of total hydrogens (total number of hydrogen substituents)
.v+ Increase number of valence (total bond order)
.v- Decrease number of valence (total bond order)
.X+ Increase number of connections (number of substituents including hydrogens)
.X- Decrease number of connections (number of substituents including hydrogens)
.R- Increase number of rings (number of rings the atom is a member of)
.R+ Decrease number of rings (number of rings the atom is a member of)
.r+ Increase smallest ring size (size of the smallest ring the atom is a member of)
.r- Decrease smallest ring size (size of the smallest ring the atom is a member of)
.rb+ Increase ring bond count (number of ring bonds next to the atom)
.rb- Decrease ring bond count (number of ring bonds next to the atom)
.s+ Increase substitution count (number of non-hydrogen and isotopic hydrogen substituents)
.s- Decrease substitution count (number of non-hydrogen and isotopic hydrogen substituents)
.h+ Increase number of implicit hydrogens (number of implicit hydrogen substituents)
.h- Decrease number of implicit hydrogens (number of implicit hydrogen substituents)
.D+ Increase degree (equivalent to substitution count: number of non-hydrogen and isotopic hydrogen substituents)
.D- Decrease degree (equivalent to substitution count: number of non-hydrogen and isotopic hydrogen substituents)
.u Mark as unsaturated atom (atom has double, triple or aromatic bond)
.a/A Mark as aromatic/aliphatic (has aromatic bond)