The following tables contain the standard residues and their sequence number (returned by MolAtom.getResidueType()).
Sequence |
Standard |
Name |
|---|---|---|
| 0 | UNK |
Unknown |
| Nucleic Acids | ||
1 |
|
Adenosine |
| 2 | +A |
Modified Adenosine |
| 3 | C |
Cytidine |
| 4 | +C |
Modified Cytidine |
| 5 | G |
Guanosine |
| 6 | +G |
Modified Guanosine |
| 7 | T |
Thymidine |
| 8 | +T |
Modified Thymidine |
| 9 | I |
Inosine |
| 10 | +I |
Modified Inosine |
| 11 | U |
Uridine |
| 12 | +U |
Modified Uridine |
| Amino Acids | ||
| 13 | ALA |
Alanine |
| 14 | ARG |
Arginine |
| 15 | ASN |
Asparagin |
| 16 | ASP |
Aspartic acid |
| 17 | CYS |
Cysteine |
| 18 | GLN |
Glutamine |
| 19 | GLU |
Glutamic acid |
| 20 | GLY |
Glycine |
| 21 | HIS |
Histidine |
| 22 | ILE |
Isoleucine |
| 23 | LEU |
Leucine |
| 24 | LYS |
Lysine |
| 25 | MET |
Methionine |
| 26 | PHE |
Phenylalanine |
| 27 | PRO |
Proline |
| 28 | SER |
Serine |
| 29 | THR |
Threonine |
| 30 | TRP |
Tryptophan |
| 31 | TYR |
Tyrosine |
| 32 | VAL |
Valine |
| 33 | ASX |
ASP/ASN ambiguous |
| 34 | GLX |
GLU/GLN ambiguous |