Results | viHumans

UniProt ID

P0CK70

Status

Reviewed

Host

Aves [TaxID: 8782]; Felis Catus (Cat) (Felis Silvestris Catus) [TaxID: 9685]; Homo Sapiens (Human) [TaxID: 9606]; Panthera Pardus (Leopard) (Felis Pardus) [TaxID: 9691]; Panthera Tigris (Tiger) [TaxID: 9694]; Sus Scrofa (Pig) [TaxID: 9823]

Gene Name

PA

Protein Name

Protein PA-X

Organism Name

Influenza A Virus (strain A/Chicken/Hong Kong/220/1997 H5N1 Genotype Gs/Gd)

Taxonomic Lineage

Viruses> SsRNA Viruses> SsRNA Negative-strand Viruses> Orthomyxoviridae> Alphainfluenzavirus> Influenza A Virus> H5N1 Subtype> Influenza A Virus (strain A/Chicken/Hong Kong/220/1997 H5N1 Genotype Gs/Gd)

RefSeq

NC_004911.1 ;  AJ404626.1 ;  NC_004909.1 ;  AJ404629.1 ;  NC_004912.1 ;  AJ278649.1 ;  NC_004910.1 ;
AJ278646.1 ;  NC_004908.1 ;  AJ278646.1 ;  NC_004905.2 ;  AJ278646.1 ;  NC_004907.1 ;  AJ404629.1 ;
NC_004906.1 ;  AJ404626.1

PubMed ID

9658115

Pathways Involved

Various pathway(s) in which protein is involved

KEGG

Not Available

Reactome

Not Available

Sequence

							MEDFVRQCFNPMIVELAEKTMKEYGEDPKIETNKFAAICTHLEVCFMYSDFHFIDERGESIIVESGDPNALLKHRFEIIEGRDRAMAWTVVNSICNTTGV
DKPKFLPDLYDYKENRFTEIGVTRREIHIYYLEKANKIKSEKTHIHIFSFTGEEMATKADYTLDEESRARIKTRLFTIRQEMASRGLWDSFVSPREAKRQ
LKKDLKSQGPCVGLPTKVSHLTSPALKTLEPMWMDSNRTAALRASFLKCRKK
						

Length

252

Alternate Sequence

Not Available

Non-standard residue

Not Available

Date of last Sequence modification

03-10-2012

Protein Existence

Inferred from homology

Amino Acid composition

Amino Acid	Count	% Frequency	Amino Acid	Count	% Frequency
Alanine (A)			Leucine (L)
Arginine (R)			Lysine (K)
Asparagine (N)			Methionine (M)
Aspartic Acid (D)			Phenylalanine (F)
Cysteine (C)			Proline (P)
Glutamine (Q)			Serine (S)
Glutamic Acid (E)			Threonine (T)
Glycine (G)			Tryptophan (W)
Histidine (H)			Tyrosine (Y)
Isoleucine (I)			Valine (V)

Sum of Absolute Deviation from Amino Acid Occurrence Frequencies

Aliphatic Index

Instability Index

Secondary Structure features

% Number of Residues in Helices	% Number of Residues in Strands	% Number of Residues in Coils

Structural Difficulty(SD) index

Role(s)

May play a role in the modulation of host immune response.

EC

Not Available

Experimentally known GO terms

GO:0003723 ; GO:0039694

Subcellular Location

Not Available

Domain(s)

Not Available

Motif(s)

Not Available

Methods of 3D structure generation

Predicted/Modelled

Experimetally known structure

Not Available

Active Site(s)

Not Available

Predicted 3D Structures

Protein couldn't be modeled using I-Tasser and Raptor X because of length constraints of the software.

Experimentally known Ligand(s)

Not Available

Virtually Screened Ligands

Virtual screening has been performed using RASPD

						Million Molecules

					
Best 20 Hit molecules 
Not Available