In the first case, the R/S chirality labels are hidden on the molecules. (This is the default option in Marvin.)
mview_name = "MView";
mview_begin("../../..", 600, 200);
mview_param("tabScale", "25");
mview_param("background", "#ffffff");
mview_param("molbg", "#ffffff");
mview_param("rows", "1");
mview_param("cols", "3");
mview_param("cell0", "|../../../mols-2d/l-tryptophan.csmol");
mview_param("cell1", "|../../../mols-2d/morphine.csmol");
mview_param("cell2", "|../../../mols-2d/dimethyl-octadien.csmol");
mview_end();
Set the value of chiralitySupport
parameter to selected to display chirality on those molecules only where the chiral
flag is set. (In this example, the chiral flag is specified for only the first two molecules.)
mview_name = "MView";
mview_begin("../../..", 600, 200);
mview_param("tabScale", "25");
mview_param("chiralitySupport", "selected");
mview_param("background", "#ffffff");
mview_param("molbg", "#ffffff");
mview_param("rows", "1");
mview_param("cols", "3");
mview_param("cell0", "|../../../mols-2d/l-tryptophan.csmol");
mview_param("cell1", "|../../../mols-2d/morphine.csmol");
mview_param("cell2", "|../../../mols-2d/dimethyl-octadien.csmol");
mview_end();
Set the value of the
chiralitySupport
parameter to all and the
ezVisible parameter
to true to display the
chirality and the E/Z isomer information of all molecules.
mview_name = "MView";
mview_begin("../../..", 600, 200);
mview_param("tabScale", "25");
mview_param("ezVisible", "true");
mview_param("chiralitySupport", "all");
mview_param("background", "#ffffff");
mview_param("molbg", "#ffffff");
mview_param("rows", "1");
mview_param("cols", "3");
mview_param("cell0", "|../../../mols-2d/l-tryptophan.csmol");
mview_param("cell1", "|../../../mols-2d/morphine.csmol");
mview_param("cell2", "|../../../mols-2d/dimethyl-octadien.csmol");
mview_end();
So far, all the MarvinView examples have shown viewing related functionalities only. It is also possible to edit cells in tables.