BHAGEERATH : An Energy Based Protein Structure Prediction Server

The present version of"Bhageerath" accepts amino acid sequence and secondary structure information to predict 5 candidate structures for the native. It is anticipated that at least one native like structure (RMSD < 7Å without end loops) is present in the final structures. The server has been validated on 80 small globular proteins. Know about Protein Folding

Download BHAGEERATH 1.0 for Solaris 10.0 environment from here.

Process ID          

E-mail Address:  (Optional)

Input Amino acid sequence    OR   Click on the Amino acid to add to the sequence



Secondary Structure Information

Select Option Auto Secondary Structure Prediction  Enter Secondary Structure Information 

Residue Range -

-->


Retrieve previous results Job ID: 


Referencs
[1] S. R. Shenoy and B. Jayaram, "Proteins: sequence to structure and function- current Status", Current Protein and Peptide Science, 2010, 11(7), 498-514.
Read Abstract
[2] B. Jayaram, Kumkum Bhushan, et al., "Bhageerath : An Energy Based Web Enabled Computer Software Suite for Limiting the Search Space of Tertiary Structures of Small Globular Proteins". Nucl. Acids Res., 2006, 34, 6195-6204.
Read Paper

[3] Pooja Narang, Kumkum Bhushan, Surojit Bose, B. Jayaram, "Protein structure evaluation using an all-atom energy based empirical scoring function", J. Biomol. Str. Dyn., 2006, 23, 385-406.
Read Abstract

[4] P. Narang, K. Bhushan, S. Bose and B. Jayaram, "A computational pathway for bracketing native-like structures for small alpha helical globular proteins", Phys. Chem. Chem. Phys., 2005, 7, 2364-2375.
Read Abstract


Please give your Comments/Suggestions to help us serve you better.

This Web Tool is funded by Department of Information Technology, DIT
Number of Hits since 20th April 2008: 65167